Add snakemake-recompile-no-dryrun command

1 files changed, 42 insertions, 0 deletions

diff --git a/lisp/km-snakemake.el b/lisp/km-snakemake.el
new file mode 100644
index 0000000..4b9c1fb
--- /dev/null
+++ b/lisp/km-snakemake.el
@@ -0,0 +1,42 @@
+;;; km-snakemake.el --- Snakemake extensions
+
+;; Copyright (C) 2012-2016 Kyle Meyer <kyle@kyleam.com>
+
+;; Author: Kyle Meyer <kyle@kyleam.com>
+;; URL: https://github.com/kyleam/emacs.d
+
+;; This program is free software; you can redistribute it and/or modify
+;; it under the terms of the GNU General Public License as published by
+;; the Free Software Foundation, either version 3 of the License, or
+;; (at your option) any later version.
+
+;; This program is distributed in the hope that it will be useful,
+;; but WITHOUT ANY WARRANTY; without even the implied warranty of
+;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;; GNU General Public License for more details.
+
+;; You should have received a copy of the GNU General Public License
+;; along with this program.  If not, see <http://www.gnu.org/licenses/>.
+
+;;; Code:
+
+
+(require 'compile)
+(require 'snakemake)
+
+;;;###autoload
+(defun km/snakemake-recompile-no-dryrun ()
+  "Recompile last Snakemake call, removing --dryrun."
+  (interactive)
+  (unless (buffer-live-p compilation-last-buffer)
+    (user-error "No previous compile command found"))
+  (with-current-buffer compilation-last-buffer
+    (let ((command (car compilation-arguments)))
+      (if (string-prefix-p snakemake-program command)
+          (setf (car compilation-arguments)
+                (replace-regexp-in-string "--dryrun" "" command))
+        (user-error "Last compile was not with %s" snakemake-program)))
+    (recompile)))
+
+(provide 'km-snakemake)
+;;; km-snakemake.el ends here