From 43f8536aee86d52e52cfa4cfc6d2e00e2ca4b04c Mon Sep 17 00:00:00 2001 From: Kyle Meyer Date: Fri, 31 Mar 2017 22:28:56 -0400 Subject: Include an example of a snakemake-shell-file-name script --- guix-snakemake-environment | 11 +++++++++++ 1 file changed, 11 insertions(+) create mode 100755 guix-snakemake-environment (limited to 'guix-snakemake-environment') diff --git a/guix-snakemake-environment b/guix-snakemake-environment new file mode 100755 index 0000000..18f6c85 --- /dev/null +++ b/guix-snakemake-environment @@ -0,0 +1,11 @@ +#!/usr/bin/env sh + +### Set up a pure environment for snakemake.el commands +### +### If `snakemake-shell-file-name' is points to this file, +### `snakemake-term-start` will start a terminal with an environment +### that exposes snakemake and the dependencies defined in "guix.scm", +### which should be located in the same directory as the current +### Snakefile. + +guix environment --pure -l guix.scm --ad-hoc snakemake -- cgit v1.2.3