| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2016-09-13 | snakemake-check-target: Recognize protected items | Kyle Meyer | |
| With 33a7c90 (snakemake-check-target: Adjust for upstream output, 2016-09-01), write-protected targets were no longer considered valid targets. | |||
| 2016-09-01 | snakemake-check-target: Adjust for upstream output | Kyle Meyer | |
| As of Snakemake v3.8.0, using a wildcard rule name signals a key error: Traceback (most recent call last): File "/usr/lib/python3.5/site-packages/snakemake/io.py", line 401, in format_match value = wildcards[name] KeyError: 'name' | |||
| 2016-09-01 | Change approach to handling errors | Kyle Meyer | |
| The approach from 7b210fc (Ignore standard error stream when digesting output, 2016-09-01) does not work well because, depending on the snakemake subcommand, the text of interest may be in the stderr stream. Instead, use lines with spaces as a way to detect non-target lines. | |||
| 2016-09-01 | snakemake-check-target: Relax output order assumption | Kyle Meyer | |
| 2016-09-01 | snakemake-check-target: Pull out regexp | Kyle Meyer | |
| 2016-09-01 | Ignore standard error stream when digesting output | Kyle Meyer | |
| Avoid including warnings as targets. | |||
| 2016-06-13 | snakemake-compile-targets: Update compile-history | Kyle Meyer | |
| 2016-05-11 | Extend snakemake-block-bounds function | Kyle Meyer | |
| Include name and block type. | |||
| 2016-05-11 | Add snakemake-block-bounds function | Kyle Meyer | |
| 2016-04-19 | Rename snakemake-graph-rule to snakemake-graph-id | Kyle Meyer | |
| With introduction of snakemake-graph-this-file, this variable isn't restricted to rule names. | |||
| 2016-04-19 | Add snakemake-graph-this-file command | Kyle Meyer | |
| 2016-04-19 | snakemake-graph: Fix docstring line break | Kyle Meyer | |
| 2016-04-19 | graph: Correct docstrings | Kyle Meyer | |
| 2016-04-17 | Add helper for splitting rule lists | Kyle Meyer | |
| 2016-04-17 | Filter out anonymous rules from rule lists | Kyle Meyer | |
| 2016-04-17 | snakemake-rule-at-point: Fix anonymous rule check | Kyle Meyer | |
| 2016-04-17 | commentary: Mention how Snakefile is located | Kyle Meyer | |
| 2016-04-17 | commentary: Add graph commands | Kyle Meyer | |
| 2016-04-17 | Add snakemake-graph-save command | Kyle Meyer | |
| Re: #9 | |||
| 2016-04-17 | Add snakemake-graph command | Kyle Meyer | |
| Re: #9 | |||
| 2016-04-16 | Support anonymous rule blocks | Kyle Meyer | |
| 2016-03-04 | popup: Consider file targets in region | Kyle Meyer | |
| 2016-02-29 | snakemake-compile: Fix target path | Kyle Meyer | |
| snakemake-file-targets-at-point expects to be called from the original directory. | |||
| 2016-02-28 | popup: Add --allowed-rules | Kyle Meyer | |
| 2016-02-28 | snakemake-all-rules: New command | Kyle Meyer | |
| 2016-02-28 | Add popup interface for compilation | Kyle Meyer | |