summaryrefslogtreecommitdiff
path: root/snakemake-test.el
diff options
context:
space:
mode:
Diffstat (limited to 'snakemake-test.el')
-rw-r--r--snakemake-test.el329
1 files changed, 120 insertions, 209 deletions
diff --git a/snakemake-test.el b/snakemake-test.el
index f092756..034350c 100644
--- a/snakemake-test.el
+++ b/snakemake-test.el
@@ -96,7 +96,6 @@ rule:
;;;; Indentation
(ert-deftest snakemake-test-indent-line/at-rule-block ()
- ;; Always shift first line of block to column 0.
(should
(string=
"rule abc:"
@@ -118,8 +117,6 @@ rule:
" rule abc :"
(snakemake-indent-line)
(buffer-string))))
-
- ;; Don't move point if beyond column 0.
(should
(string=
"rule abc: "
@@ -129,14 +126,28 @@ rule:
(buffer-string))))
(should
(string=
- "rule "
+ "
+if True:
+ rule abc:"
(snakemake-with-temp-text
- " rule <point>abc: <point>"
+ "
+if True:
+rule abc:<point>"
(snakemake-indent-line)
- (buffer-substring (point-min) (point))))))
+ (buffer-string))))
+ (should
+ (string=
+ "
+if True:
+rule abc:"
+ (snakemake-with-temp-text
+ "
+if True:
+ <point>rule abc:"
+ (snakemake-indent-line 'prev)
+ (buffer-string)))))
(ert-deftest snakemake-test-indent-line/outside-rule ()
- ;; Use standard Python mode indentation outside of rule blocks.
(should
(string=
"
@@ -149,10 +160,49 @@ def ok():
(snakemake-indent-line)
(buffer-string)))))
+(ert-deftest snakemake-test-indent-line/toplevel-command ()
+ (should
+ (string=
+ "include: \"somefile\""
+ (snakemake-with-temp-text
+ "include: \"somefile\""
+ (snakemake-indent-line)
+ (buffer-string))))
+ (should
+ (string=
+ "include: \"somefile\""
+ (snakemake-with-temp-text
+ " include: \"somefile\""
+ (snakemake-indent-line)
+ (buffer-string))))
+ (should
+ (string=
+ "
+if True:
+ include: \"somefile\"
+"
+ (snakemake-with-temp-text
+ "
+if True:
+<point>include: \"somefile\"
+"
+ (snakemake-indent-line)
+ (buffer-string))))
+ (should
+ (string=
+ "
+include:
+ \"somefile\"
+"
+ (snakemake-with-temp-text
+ "
+include:
+<point>\"somefile\"
+"
+ (snakemake-indent-line)
+ (buffer-string)))))
+
(ert-deftest snakemake-test-indent-line/field-key ()
- ;; Always indent first line to `snakemake-indent-field-offset'.
- ;; Move point to `snakemake-indent-field-offset' if it is before any
- ;; text on the line.
(should
(string=
"
@@ -168,22 +218,58 @@ rule abc:
(string=
"
rule abc:
+
"
(snakemake-with-temp-text
"
rule abc:
+
<point>"
(snakemake-indent-line)
- (snakemake-indent-line)
(buffer-string))))
(should
(string=
"
rule abc:
+ "
+ (snakemake-with-temp-text
+ "
+rule abc:
+<point>"
+ (snakemake-indent-line 'prev)
+ (buffer-string))))
+ (should
+ (string=
+ "
+rule abc:
+"
+ (snakemake-with-temp-text
+ "
+rule abc:
+ <point>"
+ (snakemake-indent-line 'prev)
+ (buffer-string))))
+ (should
+ (string=
+ "
+rule abc:
+ text"
+ (snakemake-with-temp-text
+ "
+rule abc:
+text<point>"
+ (snakemake-indent-line)
+ (buffer-substring (point-min) (point)))))
+ (should
+ (string=
+ "
+rule abc:
+
text"
(snakemake-with-temp-text
"
rule abc:
+
text<point>"
(snakemake-indent-line)
(buffer-substring (point-min) (point)))))
@@ -198,10 +284,6 @@ rule abc:
te<point>xt"
(snakemake-indent-line)
(buffer-substring (point-min) (point)))))
-
- ;; Always indent field key to `snakemake-indent-field-offset'.
- ;; Move point to `snakemake-indent-field-offset' if it is before any
- ;; text on the line.
(should
(string=
"
@@ -239,8 +321,7 @@ rule abc:
rule abc:
input: 'infile'
<point>output:"
- (snakemake-indent-line)
- (snakemake-indent-line)
+ (snakemake-indent-line 'prev)
(buffer-string))))
(should
(string=
@@ -270,10 +351,6 @@ rule abc:
(buffer-substring (point-min) (point))))))
(ert-deftest snakemake-test-indent-line/field-value ()
- ;; Always indent line below naked field key to
- ;; `snakemake-indent-field-offset' +
- ;; `snakemake-indent-value-offset'. Move point to to this position
- ;; as well if it is before any text on the line.
(should
(string=
"
@@ -298,8 +375,7 @@ rule abc:
rule abc:
output:
<point>"
- (snakemake-indent-line)
- (snakemake-indent-line)
+ (snakemake-indent-line 'prev)
(buffer-string))))
(should
(string=
@@ -314,24 +390,6 @@ rule abc:
<point>"
(snakemake-indent-line)
(buffer-string))))
-
- ;; Add step with Python indentation for non-blank lines under naked
- ;; field keys. Field keys with values starting on the same line do
- ;; not use Python indentation because this is invalid syntax in
- ;; Snakemake.
- (should
- (string=
- "
-rule abc:
- output: 'file{}{}'.format('one',
- 'two'"
- (snakemake-with-temp-text
- "
-rule abc:
- output: 'file{}{}'.format('one',
-<point>'two'"
- (snakemake-indent-line)
- (buffer-string))))
(should
(string=
"
@@ -351,39 +409,6 @@ rule abc:
(string=
"
rule abc:
- output:
- 'file{}{}'.format('one',
- "
- (snakemake-with-temp-text
- "
-rule abc:
- output:
- 'file{}{}'.format('one',
-<point>"
- (snakemake-indent-line)
- (buffer-string))))
-
- ;; On non-naked field key cycle indentation between
- ;; `snakemake-indent-field-offset' and column of previous field
- ;; value. If point is before any text on the line, move it to the
- ;; start of the text instead.
- (should
- (string=
- "
-rule abc:
- output: 'file'
- "
- (snakemake-with-temp-text
- "
-rule abc:
- output: 'file'
-<point>"
- (snakemake-indent-line)
- (buffer-string))))
- (should
- (string=
- "
-rule abc:
output: 'file'
"
(snakemake-with-temp-text
@@ -392,7 +417,6 @@ rule abc:
output: 'file'
<point>"
(snakemake-indent-line)
- (snakemake-indent-line)
(buffer-string))))
(should
(string=
@@ -404,23 +428,8 @@ rule abc:
"
rule abc:
output: 'file'
-<point>"
- (snakemake-indent-line)
- (snakemake-indent-line)
- (snakemake-indent-line)
- (buffer-string))))
- (should
- (string=
- "
-rule abc:
- output: 'file'
- 'text'"
- (snakemake-with-temp-text
- "
-rule abc:
- output: 'file'
-<point>'text'"
- (snakemake-indent-line)
+ <point>"
+ (snakemake-indent-line 'prev)
(buffer-string))))
(should
(string=
@@ -434,14 +443,13 @@ rule abc:
output: 'file'
<point>'text'"
(snakemake-indent-line)
- (snakemake-indent-line)
(buffer-string))))
(should
(string=
"
rule abc:
output: 'file'
- 'text' "
+ 'text' "
(snakemake-with-temp-text
"
rule abc:
@@ -454,7 +462,7 @@ rule abc:
"
rule abc:
output: 'file'
- "
+ "
(snakemake-with-temp-text
"
rule abc:
@@ -472,12 +480,9 @@ rule abc:
"
rule abc:
output: 'file'
-<point> 'text'"
- (snakemake-indent-line)
- (snakemake-indent-line)
+<point> 'text'"
+ (snakemake-indent-line 'prev)
(buffer-string))))
-
- ;; Indent body of run field according to Python mode.
(should
(string=
"
@@ -511,6 +516,21 @@ output:"
(should
(string=
"
+if True:
+ rule abc:
+ input: 'infile'
+ output:"
+ (snakemake-with-temp-text
+ "
+if True:
+<point>rule abc:
+input: 'infile'
+output:"
+ (indent-region (point) (point-max))
+ (buffer-string))))
+ (should
+ (string=
+ "
rule abc:
input:
one='one', two='two'
@@ -613,115 +633,6 @@ subworkflow otherworkflow:
snakefile: '../path/to/otherworkflow/Snakefile'"
(should (snakemake-in-rule-or-subworkflow-block-p))))
-(ert-deftest snakemake-test-first-field-line-p ()
- (snakemake-with-temp-text
- "
-rule abc:
-<point>"
- (should (snakemake-first-field-line-p)))
- (snakemake-with-temp-text
- "
-rule abc:
-<point> output: 'file'"
- (should (snakemake-first-field-line-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- output:
-<point>"
- (should-not (snakemake-first-field-line-p))))
-
-(ert-deftest snakemake-test-below-naked-field-p ()
- (snakemake-with-temp-text
- "
-rule abc:
- output:
-<point>"
- (should (snakemake-below-naked-field-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- output: 'file'
-<point>"
- (should-not (snakemake-below-naked-field-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- output: <point>"
- (should-not (snakemake-below-naked-field-p))))
-
-(ert-deftest snakemake-test-naked-field-line-p ()
- (snakemake-with-temp-text
- "
-rule abc:
- output:
-<point>"
- (should (snakemake-naked-field-line-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- output:
- 'file',
- <point>"
- (should (snakemake-naked-field-line-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- output: <point>"
- (should (snakemake-naked-field-line-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- output: 'file'
-<point>"
- (should-not (snakemake-naked-field-line-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- input:
- 'infile'
- output: 'file'
-<point>"
- (should-not (snakemake-naked-field-line-p))))
-
-(ert-deftest snakemake-test-run-field-line-p ()
- (snakemake-with-temp-text
- "
-rule abc:
- run:
-<point>"
- (should (snakemake-run-field-line-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- run:
- with file:
-<point>"
- (should (snakemake-run-field-line-p)))
- (snakemake-with-temp-text
- "
-rule abc:
- output: 'file'
-<point>"
- (should-not (snakemake-run-field-line-p))))
-
-(ert-deftest snakemake-test-previous-field-value-column ()
- (should (= 12
- (snakemake-with-temp-text
- "
-rule abc:
- output: 'file'
-<point>"
- (snakemake-previous-field-value-column))))
- (should (= 12
- (snakemake-with-temp-text
- "
-rule abc:
- output: 'file',
- 'another'
-<point>"
- (snakemake-previous-field-value-column)))))
-
;;; snakemake.el